Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | DWX60_02650 | Not Available | Negative | 682050 - 683003 | 35944.1 |
| tonb-dependent receptor | DWX60_02655 | Not Available | Negative | 683300 - 685603 | 85921.1 |
| hypothetical protein | DWX60_02660 | Not Available | Negative | 685712 - 686092 | 13813.3 |
| tonb-dependent receptor | DWX60_02665 | Not Available | Positive | 686531 - 688708 | 81222.5 |
| abc transporter substrate-binding protein | DWX60_02670 | Not Available | Positive | 688722 - 689879 | 43492.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DWX60_02675 | Not Available | Negative | 689987 - 691747 | 64700.8 |
| arac family transcriptional regulator | DWX60_02680 | Not Available | Negative | 691934 - 692821 | 34125.2 |
| arac family transcriptional regulator | DWX60_02685 | Not Available | Negative | 692853 - 693761 | 35396.4 |
| gnat family n-acetyltransferase | DWX60_02695 | Not Available | Positive | 694432 - 695232 | 30582.8 |
| duf1016 family protein | DWX60_02700 | Not Available | Positive | 695379 - 696482 | 42588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

