Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrophosphatase | DWX60_00200 | Not Available | Positive | 43749 - 44069 | 12338.7 |
| deoxyribose-phosphate aldolase | DWX60_00205 | Not Available | Positive | 44076 - 45023 | 34798.2 |
| polyprenyl synthetase family protein | DWX60_00210 | Not Available | Negative | 45214 - 46188 | 36285.5 |
| dna polymerase i | DWX60_00215 | Not Available | Positive | 46280 - 49195 | 109307.0 |
| hypothetical protein | DWX60_00220 | Not Available | Positive | 49266 - 49478 | 8015.87 |
| duf3836 domain-containing protein | DWX60_00225 | Not Available | Positive | 49505 - 49891 | 15047.1 |
| redox-regulated atpase ychf | DWX60_00230 | Not Available | Positive | 50093 - 51196 | 40801.9 |
| ketopantoate reductase family protein | DWX60_00235 | Not Available | Positive | 51316 - 52227 | 33014.2 |
| prolipoprotein diacylglyceryl transferase | DWX60_00240 | Not Available | Positive | 52224 - 53045 | 31477.1 |
| chloramphenicol acetyltransferase | DWX60_00245 | Not Available | Positive | 53046 - 53702 | 25262.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

