Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3127 domain-containing protein | DWX60_02485 | Not Available | Positive | 632136 - 632513 | 13929.4 |
| duf4270 domain-containing protein | DWX60_02490 | Not Available | Negative | 632763 - 634193 | 53536.1 |
| glycogen synthase | DWX60_02495 | Not Available | Negative | 634213 - 635037 | 31933.0 |
| pantoate--beta-alanine ligase | DWX60_02500 | Not Available | Positive | 635390 - 636238 | 31339.6 |
| aspartate 1-decarboxylase | DWX60_02505 | Not Available | Positive | 636260 - 636610 | 12822.7 |
| fructose-bisphosphatase class iii | DWX60_02510 | Not Available | Negative | 636741 - 638741 | 76533.3 |
| putative transporter | DWX60_02515 | Not Available | Negative | 638751 - 640412 | 59396.9 |
| nad(+) diphosphatase | DWX60_02520 | Not Available | Negative | 640489 - 641286 | 30147.3 |
| rna-binding transcriptional accessory protein | DWX60_02525 | Not Available | Negative | 641309 - 643438 | 79644.4 |
| abi family protein | DWX60_02535 | Not Available | Negative | 644923 - 645885 | 37634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

