Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_02430 | Not Available | Negative | 619385 - 619576 | 7204.75 |
| Trna-cys | Not Available | Not Available | Positive | 620086 - 620160 | Not Available |
| ferrous iron transport protein b | DWX60_02445 | Not Available | Negative | 620473 - 622941 | 92700.5 |
| trna lysidine(34) synthetase tils | DWX60_02450 | Not Available | Positive | 623062 - 624366 | 50064.5 |
| tetratricopeptide repeat protein | DWX60_02455 | Not Available | Negative | 624505 - 626205 | 62540.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DWX60_02460 | Not Available | Negative | 626242 - 627009 | 28167.3 |
| dna repair protein recn | DWX60_02465 | Not Available | Negative | 627060 - 628721 | 62006.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DWX60_02470 | Not Available | Negative | 628837 - 630033 | 43166.3 |
| 3'-5' exonuclease | DWX60_02475 | Not Available | Negative | 630030 - 630806 | 29605.2 |
| dna polymerase iii subunit beta | DWX60_02480 | Not Available | Negative | 630858 - 631982 | 41323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

