Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan-rich sensory protein | DWX60_02380 | Not Available | Positive | 610657 - 611121 | 18133.8 |
| hemerythrin domain-containing protein | DWX60_02385 | Not Available | Positive | 611248 - 611943 | 27000.4 |
| dna-binding response regulator | DWX60_02390 | Not Available | Positive | 611940 - 612551 | 22691.8 |
| (fe-s)-binding protein | DWX60_02395 | Not Available | Positive | 612863 - 613603 | 27278.1 |
| lactate utilization protein | DWX60_02400 | Not Available | Positive | 613600 - 614967 | 51539.4 |
| hypothetical protein | DWX60_02405 | Not Available | Positive | 614971 - 615558 | 21700.1 |
| pyruvate formate lyase-activating protein | DWX60_02410 | Not Available | Negative | 615660 - 616388 | 28010.6 |
| formate c-acetyltransferase | DWX60_02415 | Not Available | Negative | 616457 - 618685 | 84089.3 |
| Trna-glu | Not Available | Not Available | Positive | 618889 - 618964 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 619317 - 619406 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

