Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | DWX60_02280 | Not Available | Positive | 585894 - 587342 | 55070.9 |
| dihydrodipicolinate synthase family protein | DWX60_02285 | Not Available | Positive | 587505 - 588437 | 34028.5 |
| sodium:solute symporter | DWX60_02290 | Not Available | Positive | 588451 - 589884 | 52191.4 |
| nitronate monooxygenase | DWX60_02295 | Not Available | Negative | 590093 - 591043 | 34201.4 |
| anaerobic c4-dicarboxylate transporter | DWX60_02300 | Not Available | Positive | 591285 - 592583 | 45836.2 |
| l-asparaginase 2 | DWX60_02305 | Not Available | Positive | 592751 - 593809 | 37873.9 |
| hypothetical protein | DWX60_02310 | Not Available | Positive | 593897 - 595066 | 45099.3 |
| dicarboxylate/amino acid:cation symporter | DWX60_02315 | Not Available | Negative | 595271 - 596449 | 42038.4 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DWX60_02320 | Not Available | Positive | 596534 - 597970 | 53108.0 |
| glucose-6-phosphate dehydrogenase | DWX60_02325 | Not Available | Positive | 598019 - 599527 | 58278.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

