Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DWX60_02220 | Not Available | Positive | 575249 - 576514 | 47628.2 |
| alpha-amylase | DWX60_02225 | Not Available | Positive | 576533 - 577945 | 53806.5 |
| hypothetical protein | DWX60_02230 | Not Available | Positive | 578098 - 578463 | 13987.2 |
| biotin synthase biob | DWX60_02235 | Not Available | Positive | 578476 - 579435 | 35602.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DWX60_02240 | Not Available | Positive | 579474 - 580745 | 47780.3 |
| 8-amino-7-oxononanoate synthase | DWX60_02245 | Not Available | Positive | 580773 - 581924 | 43054.2 |
| duf452 family protein | DWX60_02250 | Not Available | Positive | 581921 - 582574 | 25142.3 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DWX60_02255 | Not Available | Positive | 582586 - 583341 | 28781.8 |
| atp-dependent dethiobiotin synthetase biod | DWX60_02260 | Not Available | Positive | 583356 - 584000 | 24302.0 |
| hypothetical protein | DWX60_02270 | Not Available | Negative | 584444 - 585169 | 25781.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

