Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5017 domain-containing protein | DWX60_02120 | Not Available | Positive | 552019 - 553911 | 69684.6 |
| rpn family recombination-promoting nuclease/putative transposase | DWX60_02125 | Not Available | Positive | 554309 - 555166 | 33083.6 |
| 30s ribosomal protein s16 | DWX60_02130 | Not Available | Negative | 555241 - 555792 | 19788.4 |
| ferritin | DWX60_02135 | Not Available | Positive | 555999 - 556481 | 17891.2 |
| alpha/beta hydrolase | DWX60_02140 | Not Available | Negative | 556995 - 557840 | 30974.9 |
| oligopeptide transporter, opt family | DWX60_02145 | Not Available | Negative | 557874 - 559865 | 70057.7 |
| hypothetical protein | DWX60_02150 | Not Available | Negative | 559951 - 560712 | 30020.0 |
| metallophosphoesterase | DWX60_02155 | Not Available | Negative | 560678 - 561484 | 31228.2 |
| duf1573 domain-containing protein | DWX60_02160 | Not Available | Negative | 561693 - 562106 | 14899.0 |
| diacylglycerol kinase family protein | DWX60_02165 | Not Available | Negative | 562201 - 562554 | 12967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

