Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | DWX60_01960 | Not Available | Negative | 504520 - 505848 | 50578.4 |
| hypothetical protein | DWX60_01970 | Not Available | Positive | 506315 - 506524 | 8014.88 |
| hypothetical protein | DWX60_01975 | Not Available | Negative | 506521 - 506808 | 11267.4 |
| j domain-containing protein | DWX60_01980 | Not Available | Negative | 506824 - 507795 | 35303.1 |
| sensor histidine kinase | DWX60_01985 | Not Available | Positive | 507842 - 509851 | 75648.6 |
| bifunctional metallophosphatase/5'-nucleotidase | DWX60_01990 | Not Available | Positive | 509856 - 511598 | 65471.6 |
| hypothetical protein | DWX60_01995 | Not Available | Positive | 511602 - 511940 | 12724.8 |
| tonb-dependent receptor | DWX60_02000 | Not Available | Positive | 512071 - 514404 | 87085.6 |
| kama family protein | DWX60_02005 | Not Available | Negative | 514493 - 516604 | 81965.3 |
| hypothetical protein | DWX60_02010 | Not Available | Negative | 516679 - 516888 | 8236.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

