Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DWX60_01910 | Not Available | Positive | 496989 - 497717 | 27616.5 |
| transporter | DWX60_01915 | Not Available | Positive | 497707 - 498423 | 26912.7 |
| Trna-arg | Not Available | Not Available | Positive | 498493 - 498566 | Not Available |
| hypothetical protein | DWX60_01925 | Not Available | Positive | 498708 - 498830 | 4374.19 |
| hypothetical protein | DWX60_01930 | Not Available | Positive | 498775 - 498978 | 7552.3 |
| hypothetical protein | DWX60_01935 | Not Available | Positive | 498972 - 499217 | 9201.97 |
| transporter | DWX60_01940 | Not Available | Positive | 499464 - 500813 | 50710.5 |
| amp-binding protein | DWX60_01945 | Not Available | Negative | 501346 - 502998 | 62219.3 |
| xre family transcriptional regulator | DWX60_01950 | Not Available | Negative | 503005 - 503580 | 21391.5 |
| riboflavin synthase | DWX60_01955 | Not Available | Positive | 503785 - 504387 | 22635.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

