Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | DWX60_01860 | Not Available | Positive | 483190 - 483834 | 24485.6 |
| duf47 domain-containing protein | DWX60_01865 | Not Available | Positive | 483874 - 484521 | 25154.2 |
| anion permease | DWX60_01870 | Not Available | Positive | 484538 - 485551 | 36000.9 |
| hypothetical protein | DWX60_01875 | Not Available | Positive | 485690 - 486052 | 13833.0 |
| tonb-dependent receptor | DWX60_01880 | Not Available | Positive | 486101 - 488260 | 82030.8 |
| duf4625 domain-containing protein | DWX60_01885 | Not Available | Positive | 488257 - 488751 | 18097.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWX60_01890 | Not Available | Positive | 489019 - 490305 | 46214.8 |
| l-lactate permease | DWX60_01895 | Not Available | Positive | 490571 - 492070 | 53140.7 |
| histone h1 | DWX60_01900 | Not Available | Positive | 492240 - 492413 | 6352.79 |
| duf5113 domain-containing protein | DWX60_01905 | Not Available | Positive | 492562 - 496959 | 168935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

