Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | DWX60_01810 | Not Available | Negative | 473331 - 473927 | 22407.5 |
| 3-isopropylmalate dehydratase large subunit | DWX60_01815 | Not Available | Negative | 473941 - 475323 | 50049.1 |
| 2-isopropylmalate synthase | DWX60_01820 | Not Available | Negative | 475341 - 476837 | 54450.0 |
| hypothetical protein | DWX60_01825 | Not Available | Negative | 477695 - 478555 | 33922.5 |
| sagb/thcox family dehydrogenase | DWX60_01830 | Not Available | Negative | 478768 - 479406 | 23316.5 |
| hypothetical protein | DWX60_01835 | Not Available | Negative | 479418 - 479915 | 18057.8 |
| transcriptional regulator | DWX60_01840 | Not Available | Positive | 480082 - 480435 | 13527.6 |
| magnesium and cobalt transport protein cora | DWX60_01845 | Not Available | Positive | 480905 - 481945 | 40265.8 |
| lrp/asnc family transcriptional regulator | DWX60_01850 | Not Available | Negative | 481970 - 482440 | 17952.8 |
| hypothetical protein | DWX60_01855 | Not Available | Positive | 482632 - 483057 | 15933.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

