Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DWX60_01700 | Not Available | Negative | 439618 - 441561 | 73611.2 |
| hypothetical protein | DWX60_01705 | Not Available | Negative | 441958 - 443634 | 63050.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_01710 | Not Available | Negative | 443652 - 445340 | 64097.1 |
| susc/raga family tonb-linked outer membrane protein | DWX60_01715 | Not Available | Negative | 445354 - 448674 | 122301.0 |
| fecr family protein | DWX60_01720 | Not Available | Negative | 448924 - 449937 | 39114.7 |
| rna polymerase sigma-70 factor | DWX60_01725 | Not Available | Negative | 450008 - 450598 | 23301.1 |
| sgnh/gdsl hydrolase family protein | DWX60_01735 | Not Available | Negative | 452585 - 453436 | 32435.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX60_01740 | Not Available | Negative | 454037 - 455545 | 57025.5 |
| susc/raga family tonb-linked outer membrane protein | DWX60_01745 | Not Available | Negative | 455567 - 458788 | 118856.0 |
| adenylosuccinate synthase | DWX60_01755 | Not Available | Negative | 460528 - 461799 | 46850.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

