Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_01585 | Not Available | Positive | 413336 - 413416 | 3113.75 |
| hypothetical protein | DWX60_01590 | Not Available | Positive | 413416 - 413778 | 14139.1 |
| hypothetical protein | DWX60_01595 | Not Available | Positive | 413836 - 414336 | 19255.3 |
| hypothetical protein | DWX60_01600 | Not Available | Positive | 414421 - 414753 | 13179.6 |
| hypothetical protein | DWX60_01605 | Not Available | Positive | 414775 - 415047 | 10385.4 |
| tonb-dependent receptor | DWX60_01615 | Not Available | Positive | 416165 - 419380 | 119824.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_01620 | Not Available | Positive | 419415 - 421313 | 71779.3 |
| duf1735 domain-containing protein | DWX60_01625 | Not Available | Positive | 421344 - 422675 | 48683.8 |
| hypothetical protein | DWX60_01630 | Not Available | Negative | 422638 - 422823 | 6755.23 |
| zinc ribbon domain-containing protein | DWX60_01640 | Not Available | Negative | 423802 - 424764 | 36786.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

