Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase | DWX60_00100 | Not Available | Negative | 20741 - 21712 | 37239.9 |
| tonb-dependent receptor | DWX60_00105 | Not Available | Negative | 21723 - 24491 | 104181.0 |
| hypothetical protein | DWX60_00110 | Not Available | Positive | 24773 - 24958 | 7353.07 |
| hypothetical protein | DWX60_00115 | Not Available | Negative | 25049 - 25528 | 18255.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 28574 - 28943 | Not Available |
| hypothetical protein | DWX60_00120 | Not Available | Negative | 25612 - 28635 | 109986.0 |
| arac family transcriptional regulator | DWX60_00125 | Not Available | Negative | 28680 - 29174 | 19177.3 |
| site-specific integrase | DWX60_00130 | Not Available | Negative | 29986 - 30924 | 36160.6 |
| murein l,d-transpeptidase | DWX60_00135 | Not Available | Positive | 31132 - 32151 | 38884.9 |
| hypothetical protein | DWX60_00140 | Not Available | Positive | 32154 - 32951 | 29189.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

