Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_01330 | Not Available | Positive | 351979 - 352605 | 24334.1 |
| uracil-dna glycosylase family protein | DWX60_01335 | Not Available | Positive | 352620 - 353213 | 22958.2 |
| Trna-trp | Not Available | Not Available | Positive | 353281 - 353356 | Not Available |
| radical sam protein | DWX60_01345 | Not Available | Negative | 353413 - 353958 | 20465.4 |
| 6-carboxytetrahydropterin synthase qued | DWX60_01350 | Not Available | Negative | 353945 - 354277 | 12835.3 |
| duf454 domain-containing protein | DWX60_01355 | Not Available | Positive | 354412 - 354774 | 14082.9 |
| hypothetical protein | DWX60_01360 | Not Available | Positive | 354947 - 355240 | 11779.2 |
| cell division protein zapa | DWX60_01365 | Not Available | Positive | 355270 - 355563 | 11772.0 |
| ribonuclease y | DWX60_01370 | Not Available | Positive | 355664 - 357199 | 57327.7 |
| hypothetical protein | DWX60_01375 | Not Available | Positive | 357391 - 358191 | 30043.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

