Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin | DWX60_01275 | Not Available | Negative | 336915 - 338021 | 41349.6 |
| hypothetical protein | DWX60_01280 | Not Available | Negative | 338054 - 338893 | 32239.6 |
| Trna-ser | Not Available | Not Available | Positive | 339572 - 339659 | Not Available |
| arac family transcriptional regulator | DWX60_01295 | Not Available | Positive | 339792 - 341543 | 68523.8 |
| thiol:disulfide interchange protein | DWX60_01300 | Not Available | Positive | 341676 - 343709 | 74735.8 |
| serine dehydratase subunit alpha family protein | DWX60_01305 | Not Available | Positive | 343902 - 345197 | 46076.9 |
| n-acetyltransferase | DWX60_01310 | Not Available | Negative | 345272 - 345550 | 10514.7 |
| helix-turn-helix domain-containing protein | DWX60_01315 | Not Available | Negative | 345700 - 349659 | 149496.0 |
| atp-binding protein | DWX60_01320 | Not Available | Positive | 349792 - 350439 | 24840.1 |
| alanine:cation symporter family protein | DWX60_01325 | Not Available | Positive | 350445 - 351845 | 51010.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

