Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWX60_01075 | Not Available | Negative | 281831 - 282397 | 22575.3 |
| Trna-his | Not Available | Not Available | Positive | 282473 - 282549 | Not Available |
| capa family protein | DWX60_01085 | Not Available | Negative | 282625 - 283698 | 40883.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DWX60_01090 | Not Available | Negative | 284634 - 285515 | 31535.7 |
| signal recognition particle protein | DWX60_01095 | Not Available | Negative | 285629 - 286951 | 48854.7 |
| mate family efflux transporter | DWX60_01100 | Not Available | Negative | 287050 - 288372 | 48712.4 |
| hypothetical protein | DWX60_01105 | Not Available | Positive | 288712 - 290073 | 49039.1 |
| rna polymerase sigma-70 factor | DWX60_01110 | Not Available | Negative | 290132 - 290692 | 21971.5 |
| duf1624 domain-containing protein | DWX60_01115 | Not Available | Negative | 290717 - 291808 | 40496.7 |
| beta-hexosaminidase | DWX60_01120 | Not Available | Positive | 292009 - 294432 | 90959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

