Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3256 family protein | DWX60_10790 | Not Available | Negative | 2652118 - 2652765 | 24349.6 |
| phenylacetate--coa ligase | DWX60_10795 | Not Available | Positive | 2652879 - 2654177 | 49228.5 |
| amino acid-binding protein | DWX60_10800 | Not Available | Positive | 2654189 - 2654617 | 15643.0 |
| response regulator | DWX60_10805 | Not Available | Negative | 2654660 - 2657386 | 103092.0 |
| carbohydrate kinase | DWX60_10810 | Not Available | Negative | 2657582 - 2658469 | 32432.2 |
| mfs transporter | DWX60_10815 | Not Available | Negative | 2658497 - 2659657 | 41814.0 |
| duf4980 domain-containing protein | DWX60_10820 | Not Available | Negative | 2659673 - 2661556 | 70937.3 |
| tonb-dependent receptor | DWX60_10825 | Not Available | Negative | 2661705 - 2664023 | 86968.6 |
| dna-binding protein | DWX60_10830 | Not Available | Positive | 2664659 - 2665270 | 23004.6 |
| prolipoprotein diacylglyceryl transferase | DWX60_10835 | Not Available | Negative | 2665312 - 2666118 | 31284.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

