Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | DWX60_01025 | Not Available | Positive | 267185 - 268219 | 38981.6 |
| mfs transporter | DWX60_01030 | Not Available | Positive | 268347 - 269543 | 43902.7 |
| hypothetical protein | DWX60_01035 | Not Available | Negative | 269540 - 270682 | 43009.4 |
| 4-amino-4-deoxychorismate lyase | DWX60_01040 | Not Available | Negative | 270772 - 271365 | 22723.3 |
| aminodeoxychorismate synthase component i | DWX60_01045 | Not Available | Negative | 271349 - 272332 | 37492.0 |
| ahpc/tsa family protein | DWX60_01050 | Not Available | Negative | 272938 - 274116 | 44862.0 |
| tlpa family protein disulfide reductase | DWX60_01055 | Not Available | Negative | 274124 - 275491 | 51271.3 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_01060 | Not Available | Negative | 275607 - 277187 | 60039.6 |
| susc/raga family tonb-linked outer membrane protein | DWX60_01065 | Not Available | Negative | 277102 - 280632 | 132036.0 |
| fecr family protein | DWX60_01070 | Not Available | Negative | 280676 - 281758 | 41467.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

