Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4831 family protein | DWX60_10740 | Not Available | Positive | 2639052 - 2640101 | 38672.6 |
| mfs transporter | DWX60_10745 | Not Available | Negative | 2640183 - 2641571 | 51163.3 |
| duf3332 domain-containing protein | DWX60_10750 | Not Available | Positive | 2641745 - 2642296 | 19853.5 |
| duf4934 domain-containing protein | DWX60_10755 | Not Available | Positive | 2642377 - 2643609 | 46077.8 |
| tolc family protein | DWX60_10760 | Not Available | Negative | 2643690 - 2645063 | 50273.8 |
| acrb/acrd/acrf family protein | DWX60_10765 | Not Available | Negative | 2645060 - 2648275 | 117242.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWX60_10770 | Not Available | Negative | 2648284 - 2649399 | 40051.3 |
| arac family transcriptional regulator | DWX60_10775 | Not Available | Positive | 2649547 - 2650380 | 32335.9 |
| class ii fructose-1,6-bisphosphate aldolase | DWX60_10780 | Not Available | Negative | 2650443 - 2651447 | 36460.6 |
| 50s ribosomal protein l31 type b | DWX60_10785 | Not Available | Positive | 2651779 - 2652033 | 9656.59 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

