Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4858 domain-containing protein | DWX60_10335 | Not Available | Positive | 2546390 - 2547160 | 29528.5 |
| hypothetical protein | DWX60_10340 | Not Available | Negative | 2547107 - 2547481 | 14330.9 |
| hypothetical protein | DWX60_10345 | Not Available | Positive | 2547436 - 2547714 | 10801.4 |
| hypothetical protein | DWX60_10350 | Not Available | Positive | 2548027 - 2549310 | 49353.3 |
| hypothetical protein | DWX60_10355 | Not Available | Positive | 2549312 - 2549587 | 10576.0 |
| hypothetical protein | DWX60_10360 | Not Available | Positive | 2549690 - 2550022 | 11809.4 |
| arac family transcriptional regulator | DWX60_10365 | Not Available | Positive | 2550415 - 2551338 | 36234.9 |
| hypothetical protein | DWX60_10370 | Not Available | Negative | 2551413 - 2552240 | 31907.4 |
| penicillin-binding protein | DWX60_10375 | Not Available | Negative | 2552447 - 2554774 | 88345.2 |
| aspartate carbamoyltransferase | DWX60_10380 | Not Available | Positive | 2554935 - 2555876 | 36259.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

