Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF20-10
Accession NumberQRWE00000000.1
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWX60_00050 | Not Available | + | 9233 - 10093 | 33239.9 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DWX60_00055 | Not Available | - | 10158 - 10913 | 27308.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DWX60_00060 | Not Available | - | 10934 - 12892 | 72651.5 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DWX60_00065 | Not Available | - | 12927 - 13613 | 25487.5 |
| phosphatase pap2 family protein | DWX60_00070 | Not Available | + | 13804 - 14415 | 22003.9 |
| s41 family peptidase | DWX60_00075 | Not Available | - | 14519 - 16120 | 60827.7 |
| phosphopantetheine adenylyltransferase | DWX60_00080 | Not Available | - | 16123 - 16578 | 17350.0 |
| type iia dna topoisomerase subunit b | DWX60_00085 | Not Available | - | 16596 - 18473 | 71021.8 |
| n-acetyltransferase | DWX60_00090 | Not Available | - | 18504 - 19640 | 43785.1 |
| sodium:calcium antiporter | DWX60_00095 | Not Available | - | 19715 - 20677 | 33562.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
