Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | DWX60_10180 | Not Available | Negative | 2512471 - 2513115 | 24453.5 |
| duf4836 family protein | DWX60_10185 | Not Available | Negative | 2513112 - 2514644 | 56144.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DWX60_10190 | Not Available | Negative | 2514649 - 2515350 | 26175.7 |
| dna helicase uvrb | DWX60_10195 | Not Available | Negative | 2515379 - 2515945 | 21297.7 |
| mfs transporter | DWX60_10200 | Not Available | Negative | 2516004 - 2517281 | 46708.2 |
| duf5024 domain-containing protein | DWX60_10205 | Not Available | Negative | 2517483 - 2518097 | 23008.7 |
| hypothetical protein | DWX60_10210 | Not Available | Negative | 2518119 - 2518685 | 21072.0 |
| sigma-70 family rna polymerase sigma factor | DWX60_10215 | Not Available | Negative | 2518676 - 2519146 | 18011.0 |
| galactose mutarotase | DWX60_10220 | Not Available | Negative | 2519332 - 2520465 | 41975.6 |
| sigma-70 family rna polymerase sigma factor | DWX60_10230 | Not Available | Positive | 2521100 - 2521645 | 20808.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

