Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWX60_09975 | Not Available | Negative | 2464009 - 2465121 | 43293.6 |
| hypothetical protein | DWX60_09980 | Not Available | Negative | 2465180 - 2466472 | 49994.2 |
| glycosyltransferase family 1 protein | DWX60_09985 | Not Available | Negative | 2466469 - 2467728 | 47294.7 |
| hypothetical protein | DWX60_09990 | Not Available | Negative | 2467752 - 2468153 | 15357.3 |
| hypothetical protein | DWX60_09995 | Not Available | Negative | 2468162 - 2468368 | 8024.83 |
| hypothetical protein | DWX60_10000 | Not Available | Positive | 2468502 - 2468909 | 15030.0 |
| hypothetical protein | DWX60_10005 | Not Available | Negative | 2469328 - 2469570 | 8635.43 |
| abc transporter permease | DWX60_10015 | Not Available | Negative | 2471059 - 2472249 | 44478.8 |
| abc transporter permease | DWX60_10020 | Not Available | Negative | 2472233 - 2473405 | 43620.6 |
| biotin/lipoyl-binding protein | DWX60_10025 | Not Available | Negative | 2473466 - 2474461 | 36927.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

