Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | DWX60_09820 | Not Available | Positive | 2425952 - 2426554 | 22140.0 |
| fad:protein fmn transferase | DWX60_09825 | Not Available | Negative | 2426713 - 2427729 | 37820.5 |
| manganese efflux pump | DWX60_09830 | Not Available | Negative | 2427743 - 2428315 | 21225.7 |
| hypothetical protein | DWX60_09835 | Not Available | Negative | 2428319 - 2429020 | 26539.9 |
| hypothetical protein | DWX60_09840 | Not Available | Negative | 2428968 - 2429516 | 20757.9 |
| glycosyltransferase | DWX60_09845 | Not Available | Negative | 2429518 - 2430471 | 36365.1 |
| duf4199 domain-containing protein | DWX60_09850 | Not Available | Negative | 2430475 - 2431008 | 20538.6 |
| hypothetical protein | DWX60_09855 | Not Available | Negative | 2431015 - 2431263 | 9849.11 |
| Trna-thr | Not Available | Not Available | Positive | 2431268 - 2431341 | Not Available |
| aaa family atpase | DWX60_09870 | Not Available | Positive | 2434097 - 2435665 | 60563.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

