Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWX60_00915 | Not Available | Positive | 249826 - 250758 | 35626.8 |
| hypothetical protein | DWX60_00920 | Not Available | Positive | 250767 - 251018 | 9670.05 |
| hypothetical protein | DWX60_00925 | Not Available | Positive | 251030 - 251152 | 4326.09 |
| hypothetical protein | DWX60_00930 | Not Available | Positive | 251253 - 251438 | 7284.95 |
| radical sam mobile pair protein b | DWX60_00945 | Not Available | Negative | 253821 - 254696 | 33883.9 |
| radical sam mobile pair protein a | DWX60_00950 | Not Available | Negative | 254693 - 255361 | 26048.5 |
| cupin domain-containing protein | DWX60_00955 | Not Available | Negative | 255385 - 255849 | 16922.2 |
| mbl fold metallo-hydrolase | DWX60_00960 | Not Available | Negative | 255883 - 256662 | 28812.0 |
| arac family transcriptional regulator | DWX60_00965 | Not Available | Positive | 256799 - 257698 | 35843.5 |
| Trna-ser | Not Available | Not Available | Positive | 257922 - 258012 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

