Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | DWX60_09410 | Not Available | Positive | 2343012 - 2343560 | 20451.8 |
| chromate transporter | DWX60_09415 | Not Available | Positive | 2343557 - 2344129 | 21054.4 |
| hypothetical protein | DWX60_09420 | Not Available | Negative | 2344416 - 2345915 | 58057.4 |
| excinuclease abc subunit uvra | DWX60_09425 | Not Available | Positive | 2345997 - 2348798 | 104844.0 |
| endonuclease/exonuclease/phosphatase family protein | DWX60_09430 | Not Available | Positive | 2349044 - 2350075 | 39607.7 |
| beta-n-acetylhexosaminidase | DWX60_09435 | Not Available | Positive | 2350132 - 2352438 | 85824.0 |
| hypothetical protein | DWX60_09440 | Not Available | Negative | 2352548 - 2353039 | 17873.6 |
| hypothetical protein | DWX60_09445 | Not Available | Negative | 2353058 - 2353279 | 8766.94 |
| carbon starvation protein a | DWX60_09450 | Not Available | Negative | 2353266 - 2354696 | 52225.5 |
| s-layer protein | DWX60_09455 | Not Available | Positive | 2354775 - 2356454 | 64158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

