Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DWX60_09355 | Not Available | Positive | 2325582 - 2326580 | 38414.6 |
| hypothetical protein | DWX60_09360 | Not Available | Negative | 2327344 - 2328423 | 40339.9 |
| duf108 domain-containing protein | DWX60_09365 | Not Available | Positive | 2328720 - 2329508 | 28162.8 |
| molecular chaperone djla | DWX60_09375 | Not Available | Positive | 2330481 - 2331263 | 29022.0 |
| peptide chain release factor 3 | DWX60_09380 | Not Available | Negative | 2331338 - 2332906 | 59982.5 |
| dtdp-4-dehydrorhamnose reductase | DWX60_09385 | Not Available | Negative | 2332913 - 2333770 | 31996.1 |
| duf4924 family protein | DWX60_09390 | Not Available | Negative | 2333785 - 2334327 | 21340.1 |
| lyse family translocator | DWX60_09395 | Not Available | Negative | 2334399 - 2335058 | 24319.7 |
| phosphoribosylformylglycinamidine synthase | DWX60_09400 | Not Available | Positive | 2335209 - 2338913 | 137230.0 |
| hybrid sensor histidine kinase/response regulator | DWX60_09405 | Not Available | Positive | 2338991 - 2343007 | 154470.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

