Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DWX60_09300 | Not Available | Negative | 2310627 - 2312114 | 56959.7 |
| acrb/acrd/acrf family protein | DWX60_09305 | Not Available | Negative | 2312101 - 2315181 | 115327.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWX60_09310 | Not Available | Negative | 2315186 - 2316253 | 39187.2 |
| o-antigen ligase domain-containing protein | DWX60_09315 | Not Available | Negative | 2316306 - 2317955 | 61971.3 |
| transglutaminase domain-containing protein | DWX60_09320 | Not Available | Negative | 2317958 - 2319469 | 58282.2 |
| signal peptidase i | DWX60_09325 | Not Available | Negative | 2319471 - 2320373 | 35333.0 |
| hypothetical protein | DWX60_09330 | Not Available | Negative | 2320382 - 2322286 | 73739.7 |
| 6-bladed beta-propeller | DWX60_09335 | Not Available | Negative | 2322566 - 2323660 | 41967.5 |
| hypothetical protein | DWX60_09340 | Not Available | Negative | 2323749 - 2323997 | 9017.95 |
| hypothetical protein | DWX60_09350 | Not Available | Negative | 2325107 - 2325328 | 7881.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

