Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | DWX60_00865 | Not Available | Positive | 235595 - 237415 | 68001.7 |
| ribonuclease h | DWX60_00870 | Not Available | Positive | 237416 - 238042 | 23847.5 |
| alkaline phosphatase family protein | DWX60_00875 | Not Available | Positive | 238058 - 239884 | 68066.1 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | DWX60_00880 | Not Available | Negative | 239968 - 241692 | 65345.0 |
| gtra family protein | DWX60_00885 | Not Available | Positive | 241779 - 242153 | 14231.0 |
| glycosyltransferase | DWX60_00890 | Not Available | Positive | 242190 - 243137 | 36580.4 |
| lta synthase family protein | DWX60_00895 | Not Available | Negative | 243168 - 245195 | 77422.9 |
| glycosyltransferase family 2 protein | DWX60_00900 | Not Available | Negative | 245374 - 246366 | 38800.9 |
| glycosyltransferase | DWX60_00905 | Not Available | Positive | 246612 - 247928 | 50502.2 |
| abc transporter atp-binding protein | DWX60_00910 | Not Available | Positive | 247986 - 249824 | 68820.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

