Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | DWX60_09050 | Not Available | Positive | 2238500 - 2239840 | 51240.8 |
| susc/raga family tonb-linked outer membrane protein | DWX60_09055 | Not Available | Positive | 2239870 - 2243151 | 123231.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_09060 | Not Available | Positive | 2243164 - 2244606 | 54942.9 |
| peptidylprolyl isomerase | DWX60_09065 | Not Available | Negative | 2244754 - 2245332 | 21017.5 |
| hypothetical protein | DWX60_09070 | Not Available | Positive | 2245695 - 2246069 | 14063.1 |
| dihydroxy-acid dehydratase | DWX60_09075 | Not Available | Positive | 2246480 - 2248282 | 64117.2 |
| biosynthetic-type acetolactate synthase large subunit | DWX60_09080 | Not Available | Positive | 2248382 - 2250079 | 61841.6 |
| acetolactate synthase small subunit | DWX60_09085 | Not Available | Positive | 2250090 - 2250644 | 21284.6 |
| acyl-[acyl-carrier-protein] thioesterase | DWX60_09090 | Not Available | Positive | 2250644 - 2251387 | 28542.1 |
| ketol-acid reductoisomerase | DWX60_09095 | Not Available | Positive | 2251422 - 2252465 | 38168.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

