Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | DWX60_08950 | Not Available | Negative | 2219659 - 2220504 | 32216.8 |
| phosphotransferase | DWX60_08955 | Not Available | Negative | 2220501 - 2221931 | 55485.1 |
| purine permease | DWX60_08960 | Not Available | Negative | 2222034 - 2223365 | 46640.3 |
| xanthine phosphoribosyltransferase | DWX60_08965 | Not Available | Negative | 2223370 - 2223936 | 20888.7 |
| hypothetical protein | DWX60_08970 | Not Available | Positive | 2224293 - 2224616 | 11727.4 |
| ytxh domain-containing protein | DWX60_08975 | Not Available | Positive | 2224823 - 2225071 | 9279.04 |
| nitroreductase family protein | DWX60_08980 | Not Available | Negative | 2225161 - 2225790 | 23123.0 |
| dipeptidase | DWX60_08985 | Not Available | Negative | 2225803 - 2227155 | 49910.0 |
| chorismate synthase | DWX60_08990 | Not Available | Negative | 2227169 - 2228245 | 39168.8 |
| lema family protein | DWX60_08995 | Not Available | Negative | 2228454 - 2229035 | 21752.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

