Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gggtgrt protein | DWX60_08900 | Not Available | Negative | 2209664 - 2210674 | 35757.9 |
| hypothetical protein | DWX60_08905 | Not Available | Negative | 2210693 - 2211394 | 25285.6 |
| duf4375 domain-containing protein | DWX60_08910 | Not Available | Positive | 2211631 - 2212140 | 19574.0 |
| sodium:glutamate symporter | DWX60_08915 | Not Available | Negative | 2212310 - 2213689 | 49829.2 |
| hypothetical protein | DWX60_08920 | Not Available | Positive | 2214112 - 2214858 | 27237.5 |
| hypothetical protein | DWX60_08925 | Not Available | Negative | 2215019 - 2215198 | 6837.4 |
| hypothetical protein | DWX60_08930 | Not Available | Negative | 2215143 - 2215265 | 4284.06 |
| duf1282 domain-containing protein | DWX60_08935 | Not Available | Positive | 2215651 - 2216220 | 21095.2 |
| ssra-binding protein | DWX60_08940 | Not Available | Positive | 2216220 - 2216672 | 17572.4 |
| methionine synthase | DWX60_08945 | Not Available | Positive | 2216710 - 2219463 | 100862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

