Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | DWX60_08750 | Not Available | Negative | 2181260 - 2182978 | 62465.2 |
| esterase family protein | DWX60_08755 | Not Available | Positive | 2183076 - 2183894 | 30789.0 |
| sdr family nad(p)-dependent oxidoreductase | DWX60_08760 | Not Available | Positive | 2183899 - 2184657 | 27179.9 |
| alpha-amlyase | DWX60_08765 | Not Available | Negative | 2184753 - 2185001 | 9267.24 |
| sodium ion-translocating decarboxylase subunit beta | DWX60_08770 | Not Available | Negative | 2185176 - 2186336 | 40880.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DWX60_08775 | Not Available | Negative | 2186338 - 2186769 | 15152.5 |
| lamin tail domain-containing protein | DWX60_08780 | Not Available | Negative | 2186793 - 2187722 | 34102.0 |
| acyl-coa carboxylase subunit beta | DWX60_08785 | Not Available | Negative | 2187750 - 2189303 | 56473.9 |
| methylmalonyl-coa epimerase | DWX60_08790 | Not Available | Negative | 2189406 - 2189819 | 14910.1 |
| gnat family n-acetyltransferase | DWX60_08795 | Not Available | Negative | 2189976 - 2190998 | 40121.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

