Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine acetyltransferase | DWX60_00815 | Not Available | Negative | 220106 - 221014 | 32799.2 |
| ribonuclease r | DWX60_00820 | Not Available | Negative | 221315 - 223462 | 81953.4 |
| cation transporter | DWX60_00825 | Not Available | Positive | 223593 - 224495 | 32965.4 |
| nad(p)-dependent oxidoreductase | DWX60_00830 | Not Available | Positive | 224506 - 225552 | 40078.3 |
| phosphatase pap2 family protein | DWX60_00835 | Not Available | Positive | 225543 - 226520 | 37786.7 |
| duf2807 domain-containing protein | DWX60_00840 | Not Available | Positive | 226697 - 227548 | 29119.1 |
| trna dihydrouridine synthase dusb | DWX60_00845 | Not Available | Negative | 227644 - 228633 | 37154.4 |
| u32 family peptidase | DWX60_00850 | Not Available | Positive | 228784 - 230046 | 47014.9 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_00855 | Not Available | Negative | 230335 - 231885 | 58698.7 |
| tonb-dependent receptor | DWX60_00860 | Not Available | Negative | 231901 - 234987 | 114202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

