Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | DWX60_08580 | Not Available | Negative | 2140485 - 2141486 | 37626.8 |
| mfs transporter | DWX60_08585 | Not Available | Negative | 2141519 - 2142817 | 47979.9 |
| duf4838 domain-containing protein | DWX60_08590 | Not Available | Negative | 2142865 - 2145096 | 84816.5 |
| duf1735 domain-containing protein | DWX60_08595 | Not Available | Negative | 2145170 - 2146165 | 37306.6 |
| duf1735 domain-containing protein | DWX60_08600 | Not Available | Negative | 2146184 - 2147305 | 41486.2 |
| endoglycosidase | DWX60_08605 | Not Available | Negative | 2147323 - 2148381 | 39770.5 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX60_08610 | Not Available | Negative | 2148413 - 2149954 | 57036.3 |
| susc/raga family tonb-linked outer membrane protein | DWX60_08615 | Not Available | Negative | 2149968 - 2153069 | 114667.0 |
| glycoside hydrolase family 97 protein | DWX60_08620 | Not Available | Negative | 2153668 - 2155683 | 75794.1 |
| endonuclease | DWX60_08625 | Not Available | Negative | 2155871 - 2156716 | 31930.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

