Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DWX60_08325 | Not Available | Positive | 2061756 - 2062757 | 39459.9 |
| glycosyltransferase | DWX60_08330 | Not Available | Positive | 2062797 - 2063690 | 34473.9 |
| epsg family protein | DWX60_08335 | Not Available | Positive | 2063683 - 2064888 | 47352.6 |
| hypothetical protein | DWX60_08340 | Not Available | Positive | 2065025 - 2065591 | 22627.0 |
| susc/raga family tonb-linked outer membrane protein | DWX60_08345 | Not Available | Positive | 2065703 - 2068951 | 119415.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX60_08350 | Not Available | Positive | 2068979 - 2070865 | 72194.3 |
| susc/raga family tonb-linked outer membrane protein | DWX60_08355 | Not Available | Positive | 2071331 - 2074732 | 124099.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX60_08360 | Not Available | Positive | 2074754 - 2076667 | 73231.5 |
| aaa family atpase | DWX60_08365 | Not Available | Positive | 2076894 - 2078087 | 45837.4 |
| susc/raga family tonb-linked outer membrane protein | DWX60_08375 | Not Available | Positive | 2078521 - 2081502 | 109165.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

