Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWX60_08110 | Not Available | Positive | 2015694 - 2016509 | 31373.7 |
| glycosyltransferase | DWX60_08115 | Not Available | Negative | 2016527 - 2017474 | 36866.2 |
| duf4422 domain-containing protein | DWX60_08120 | Not Available | Negative | 2017478 - 2018302 | 32718.4 |
| acyltransferase | DWX60_08125 | Not Available | Negative | 2018287 - 2018898 | 22980.1 |
| glycosyltransferase family 2 protein | DWX60_08130 | Not Available | Negative | 2018903 - 2020063 | 44269.4 |
| glycosyltransferase | DWX60_08135 | Not Available | Negative | 2020071 - 2021195 | 43034.3 |
| glycosyltransferase family 2 protein | DWX60_08140 | Not Available | Negative | 2021192 - 2022097 | 34528.7 |
| o-antigen ligase domain-containing protein | DWX60_08145 | Not Available | Negative | 2022078 - 2023538 | 54856.9 |
| hypothetical protein | DWX60_08150 | Not Available | Negative | 2023542 - 2025689 | 82552.7 |
| hypothetical protein | DWX60_08155 | Not Available | Negative | 2025695 - 2026558 | 32645.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

