Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DWX60_08060 | Not Available | Negative | 2005163 - 2006296 | 43556.6 |
| glycosyltransferase family 4 protein | DWX60_08065 | Not Available | Negative | 2006293 - 2007444 | 44610.8 |
| glycosyltransferase family 4 protein | DWX60_08070 | Not Available | Negative | 2007441 - 2008586 | 44080.2 |
| hypothetical protein | DWX60_08075 | Not Available | Positive | 2008558 - 2008740 | 7023.73 |
| glycosyltransferase family 2 protein | DWX60_08080 | Not Available | Positive | 2008815 - 2009840 | 40578.1 |
| glycosyltransferase family 2 protein | DWX60_08085 | Not Available | Negative | 2009861 - 2010811 | 37209.2 |
| glycosyltransferase family 4 protein | DWX60_08090 | Not Available | Positive | 2011424 - 2012605 | 44899.2 |
| abc transporter permease | DWX60_08095 | Not Available | Positive | 2012592 - 2013455 | 33233.7 |
| abc transporter atp-binding protein | DWX60_08100 | Not Available | Positive | 2013469 - 2014740 | 46668.5 |
| glycosyl transferase | DWX60_08105 | Not Available | Positive | 2014756 - 2015673 | 35678.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

