Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DWX60_07960 | Not Available | Positive | 1983215 - 1985560 | 89810.8 |
| hsp20/alpha crystallin family protein | DWX60_07965 | Not Available | Negative | 1985801 - 1986244 | 16943.0 |
| hypothetical protein | DWX60_07970 | Not Available | Negative | 1986509 - 1986967 | 17636.3 |
| linear amide c-n hydrolase | DWX60_07975 | Not Available | Negative | 1987202 - 1988260 | 39406.4 |
| hypothetical protein | DWX60_07980 | Not Available | Negative | 1988419 - 1988658 | 9515.93 |
| hpaii family restriction endonuclease | DWX60_07985 | Not Available | Positive | 1988761 - 1989849 | 41489.1 |
| alpha-amylase | DWX60_07990 | Not Available | Negative | 1989978 - 1991675 | 64713.6 |
| phospholipase | DWX60_07995 | Not Available | Negative | 1991691 - 1992476 | 29317.4 |
| [acyl-carrier-protein] s-malonyltransferase | DWX60_08000 | Not Available | Negative | 1992601 - 1993488 | 31271.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DWX60_08005 | Not Available | Negative | 1993615 - 1994439 | 29140.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

