Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DWX60_07855 | Not Available | Negative | 1954564 - 1954806 | 8923.97 |
| glycoside hydrolase family 28 protein | DWX60_07865 | Not Available | Positive | 1955241 - 1956210 | 36018.2 |
| hypothetical protein | DWX60_07870 | Not Available | Positive | 1956274 - 1957245 | 36922.5 |
| Trna-thr | Not Available | Not Available | Positive | 1957607 - 1957682 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | DWX60_07880 | Not Available | Negative | 1957707 - 1958531 | 31853.4 |
| hypothetical protein | DWX60_07885 | Not Available | Negative | 1958605 - 1958784 | 7280.74 |
| hypothetical protein | DWX60_07890 | Not Available | Negative | 1958781 - 1959008 | 8968.86 |
| asparagine synthase b | DWX60_07895 | Not Available | Negative | 1959309 - 1960979 | 62823.6 |
| glutamate synthase subunit beta | DWX60_07900 | Not Available | Negative | 1960996 - 1962336 | 48796.7 |
| glutamate synthase large subunit | DWX60_07905 | Not Available | Negative | 1962377 - 1966855 | 164847.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

