Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | DWX60_07805 | Not Available | Positive | 1943632 - 1944228 | 22081.9 |
| nadh-quinone oxidoreductase subunit c/d | DWX60_07810 | Not Available | Positive | 1944225 - 1945784 | 59743.6 |
| nadh-quinone oxidoreductase subunit h | DWX60_07815 | Not Available | Positive | 1945908 - 1946984 | 40265.7 |
| nadh-quinone oxidoreductase subunit i | DWX60_07820 | Not Available | Positive | 1946984 - 1947436 | 16944.7 |
| nadh-quinone oxidoreductase subunit j | DWX60_07825 | Not Available | Positive | 1947452 - 1947955 | 18224.2 |
| nadh-quinone oxidoreductase subunit nuok | DWX60_07830 | Not Available | Positive | 1947961 - 1948269 | 11758.6 |
| nadh-quinone oxidoreductase subunit l | DWX60_07835 | Not Available | Positive | 1948272 - 1950173 | 70331.2 |
| nadh-quinone oxidoreductase subunit m | DWX60_07840 | Not Available | Positive | 1950227 - 1951708 | 53794.6 |
| nadh-quinone oxidoreductase subunit n | DWX60_07845 | Not Available | Positive | 1951739 - 1953160 | 52296.5 |
| glucuronyl hydrolase | DWX60_07850 | Not Available | Positive | 1953336 - 1954562 | 46658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

