Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | DWX60_07490 | Not Available | Positive | 1844363 - 1845658 | 49713.2 |
| methylenetetrahydrofolate reductase | DWX60_07495 | Not Available | Positive | 1846014 - 1846967 | 36211.4 |
| dna polymerase iii subunit delta | DWX60_07500 | Not Available | Positive | 1846995 - 1848119 | 43533.9 |
| hypothetical protein | DWX60_07505 | Not Available | Positive | 1848209 - 1849723 | 57726.9 |
| gliding motility lipoprotein gldh | DWX60_07510 | Not Available | Positive | 1849686 - 1850183 | 18762.5 |
| rod shape-determining protein roda | DWX60_07515 | Not Available | Negative | 1850187 - 1851641 | 54268.6 |
| penicillin-binding protein 2 | DWX60_07520 | Not Available | Negative | 1851622 - 1853472 | 69177.4 |
| rod shape-determining protein mred | DWX60_07525 | Not Available | Negative | 1853472 - 1853972 | 18956.0 |
| rod shape-determining protein mrec | DWX60_07530 | Not Available | Negative | 1853981 - 1854829 | 31395.4 |
| rod shape-determining protein | DWX60_07535 | Not Available | Negative | 1854935 - 1855957 | 36937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

