Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | DWX60_07440 | Not Available | Negative | 1837499 - 1837789 | 10804.2 |
| 50s ribosomal protein l4 | DWX60_07445 | Not Available | Negative | 1837811 - 1838437 | 23045.8 |
| 50s ribosomal protein l3 | DWX60_07450 | Not Available | Negative | 1838437 - 1839054 | 21900.8 |
| 30s ribosomal protein s10 | DWX60_07455 | Not Available | Negative | 1839075 - 1839380 | 11419.0 |
| elongation factor g | DWX60_07460 | Not Available | Negative | 1839465 - 1841582 | 77460.5 |
| 30s ribosomal protein s7 | DWX60_07465 | Not Available | Negative | 1841614 - 1842090 | 18204.1 |
| 30s ribosomal protein s12 | DWX60_07470 | Not Available | Negative | 1842239 - 1842652 | 14994.4 |
| duf3467 domain-containing protein | DWX60_07475 | Not Available | Negative | 1842841 - 1843182 | 12561.0 |
| hypothetical protein | DWX60_07480 | Not Available | Negative | 1843605 - 1843856 | 9695.77 |
| hypothetical protein | DWX60_07485 | Not Available | Negative | 1843899 - 1843994 | 3305.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

