Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | DWX60_07340 | Not Available | Negative | 1827730 - 1827948 | 8235.14 |
| type i methionyl aminopeptidase | DWX60_07345 | Not Available | Negative | 1827950 - 1828747 | 29142.0 |
| preprotein translocase subunit secy | DWX60_07350 | Not Available | Negative | 1828758 - 1830104 | 49282.7 |
| 50s ribosomal protein l15 | DWX60_07355 | Not Available | Negative | 1830109 - 1830555 | 15681.0 |
| 50s ribosomal protein l30 | DWX60_07360 | Not Available | Negative | 1830586 - 1830762 | 6433.21 |
| 30s ribosomal protein s5 | DWX60_07365 | Not Available | Negative | 1830772 - 1831290 | 17941.0 |
| 50s ribosomal protein l18 | DWX60_07370 | Not Available | Negative | 1831294 - 1831635 | 12645.5 |
| 50s ribosomal protein l6 | DWX60_07375 | Not Available | Negative | 1831657 - 1832226 | 20910.5 |
| 30s ribosomal protein s8 | DWX60_07380 | Not Available | Negative | 1832241 - 1832636 | 14565.0 |
| 30s ribosomal protein s14 | DWX60_07385 | Not Available | Negative | 1832694 - 1832993 | 11077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

