Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_07290 | Not Available | Negative | 1820931 - 1821176 | 9603.22 |
| hypothetical protein | DWX60_07295 | Not Available | Positive | 1821178 - 1822977 | 68631.8 |
| hypothetical protein | DWX60_07300 | Not Available | Negative | 1823072 - 1823611 | 19772.7 |
| hypothetical protein | DWX60_07305 | Not Available | Negative | 1823730 - 1824155 | 15744.0 |
| 50s ribosomal protein l17 | DWX60_07310 | Not Available | Negative | 1824566 - 1825054 | 17965.6 |
| dna-directed rna polymerase subunit alpha | DWX60_07315 | Not Available | Negative | 1825058 - 1826050 | 37535.1 |
| 30s ribosomal protein s4 | DWX60_07320 | Not Available | Negative | 1826062 - 1826667 | 22540.2 |
| 30s ribosomal protein s11 | DWX60_07325 | Not Available | Negative | 1826784 - 1827173 | 13878.8 |
| 30s ribosomal protein s13 | DWX60_07330 | Not Available | Negative | 1827185 - 1827565 | 14121.3 |
| 50s ribosomal protein l36 | DWX60_07335 | Not Available | Negative | 1827599 - 1827715 | 4586.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

