Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4221 domain-containing protein | DWX60_07240 | Not Available | Positive | 1813086 - 1814249 | 45427.0 |
| duf1573 domain-containing protein | DWX60_07245 | Not Available | Positive | 1814246 - 1814974 | 27173.6 |
| acyl-coa thioesterase | DWX60_07250 | Not Available | Negative | 1815039 - 1815482 | 16848.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWX60_07255 | Not Available | Positive | 1815605 - 1816882 | 46994.8 |
| sdr family nad(p)-dependent oxidoreductase | DWX60_07260 | Not Available | Positive | 1816893 - 1817621 | 27088.2 |
| duf4252 domain-containing protein | DWX60_07265 | Not Available | Positive | 1817956 - 1818450 | 19072.2 |
| rna polymerase sigma factor | DWX60_07270 | Not Available | Positive | 1818437 - 1818949 | 20041.8 |
| hypothetical protein | DWX60_07275 | Not Available | Positive | 1818936 - 1819466 | 20172.2 |
| duf4252 domain-containing protein | DWX60_07280 | Not Available | Positive | 1819463 - 1819921 | 17333.2 |
| hypothetical protein | DWX60_07285 | Not Available | Negative | 1820176 - 1820847 | 23981.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

