Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DWX60_06965 | Not Available | Negative | 1718058 - 1719038 | 38069.7 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DWX60_06975 | Not Available | Positive | 1719486 - 1721000 | 55852.0 |
| duf3109 family protein | DWX60_06980 | Not Available | Positive | 1721103 - 1721684 | 22127.6 |
| hypothetical protein | DWX60_06985 | Not Available | Positive | 1721752 - 1722939 | 44389.7 |
| hypothetical protein | DWX60_06995 | Not Available | Negative | 1723751 - 1726636 | 113955.0 |
| protease lon-related brex system protein brxl | DWX60_07000 | Not Available | Negative | 1726650 - 1728686 | 75582.8 |
| pglz domain-containing protein | DWX60_07005 | Not Available | Negative | 1728698 - 1730893 | 83191.5 |
| atp-dependent dna helicase | DWX60_07010 | Not Available | Negative | 1730987 - 1732624 | 62627.7 |
| brex-1 system adenine-specific dna-methyltransferase pglx | DWX60_07015 | Not Available | Negative | 1732649 - 1736323 | 141323.0 |
| brex system p-loop protein brxc | DWX60_07020 | Not Available | Negative | 1736352 - 1739990 | 139026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

