Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | DWX60_06865 | Not Available | Positive | 1691391 - 1694402 | 111115.0 |
| cvpa family protein | DWX60_06870 | Not Available | Positive | 1694541 - 1695044 | 18078.1 |
| fe-s cluster assembly protein sufb | DWX60_06875 | Not Available | Positive | 1695052 - 1696503 | 54039.0 |
| fe-s cluster assembly atpase sufc | DWX60_06880 | Not Available | Positive | 1696531 - 1697283 | 27654.6 |
| fe-s cluster assembly protein sufd | DWX60_06885 | Not Available | Positive | 1697313 - 1698656 | 50473.4 |
| cysteine desulfurase | DWX60_06890 | Not Available | Positive | 1698663 - 1699877 | 45098.1 |
| hypothetical protein | DWX60_06895 | Not Available | Negative | 1699953 - 1700159 | 7939.36 |
| hypothetical protein | DWX60_06900 | Not Available | Positive | 1700107 - 1700385 | 10456.8 |
| hypothetical protein | DWX60_06905 | Not Available | Positive | 1700442 - 1700642 | 7774.93 |
| gnat family n-acetyltransferase | DWX60_06910 | Not Available | Negative | 1700753 - 1701175 | 16247.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

